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<title>KEGG M.capsulatus: MCA0779</title>
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	    dna_from  = Number(form.FROM.value)  - plus_down;
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	url = "/kegg-bin/cut_sequence_genes.pl?FROM=" + dna_from + "&TO=" + dna_to +"&VECTOR=" + vector + "&ORG=" + org;
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<table border="0" cellpadding="0" cellspacing="0" width="650"><tbody><tr><td width="70"><a href="http://www.genome.jp/kegg/kegg2.html"><img src="mxa_F_sequence_files/kegg1.gif" alt="KEGG" align="middle" border="0"></a></td><td>&nbsp;&nbsp;&nbsp;</td><td><a name="mca:MCA0779"></a><font class="title1">Methylococcus capsulatus: MCA0779</font></td><td align="right" valign="bottom"><a href="javascript:void(window.open('/kegg/document/help_bget_genes.html','KEGG_Help','toolbar=no,location=no,directories=no,width=720,height=640,resizable=yes,scrollbars=yes'))"><img onmouseup="btn(this,'Hb')" onmouseout="btn(this,'Hb')" onmousedown="btn(this,'Hbd')" onmouseover="btn(this,'Hbh')" alt="Help" name="help" src="mxa_F_sequence_files/button_Hb.gif" align="middle" border="0"></a></td></tr></tbody></table>
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<form method="post" action="javascript:Link_XtrctSeq2(document.form1);" enctype="application/x-www-form-urlencoded" name="form1">
<input name="ACCESSION" value="MCA0779" type="hidden">
<input name="KEGGID" value="mca:MCA0779" type="hidden">
<input name="ORG" value="mca" type="hidden">
<input name="FROM" value="823278" type="hidden">
<input name="TO" value="825083" type="hidden">
<input name="VECTOR" value="1" type="hidden">
<input name="CHR" value="" type="hidden">
<input name="source" value="OPEN" type="hidden">
<input name="pos" value="823278..825083" type="hidden">
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<tbody><tr><th class="th10" style="border-color: rgb(0, 0, 0); border-width: 1px 0px 0px 1px; border-style: solid;" align="left" valign="middle"><nobr>Entry</nobr></th>
<td class="td10" style="border-color: rgb(0, 0, 0); border-width: 1px 1px 0px; border-style: solid;"><table border="0" cellpadding="0" cellspacing="0" width="555"><tbody><tr><td align="left"><code>MCA0779&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;CDS&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;<a href="http://www.genome.jp/dbget-bin/www_bget?gn:T00205">M.capsulatus</a>&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;<br>
</code></td> <td align="right"><br></td></tr></tbody></table></td></tr>


<tr><th class="th11" style="border-color: rgb(0, 0, 0); border-width: 1px 0px 0px 1px; border-style: solid;" align="left" valign="top"><nobr>Gene name</nobr></th>
<td class="td11" style="border-color: rgb(0, 0, 0); border-width: 1px 1px 0px; border-style: solid;"><div style="width: 555px; overflow-x: auto; overflow-y: hidden;">mxaF<br>
</div></td></tr>


<tr><th class="th10" style="border-color: rgb(0, 0, 0); border-width: 1px 0px 0px 1px; border-style: solid;" align="left" valign="top"><nobr>Definition</nobr></th>
<td class="td10" style="border-color: rgb(0, 0, 0); border-width: 1px 1px 0px; border-style: solid;"><div style="width: 555px; overflow-x: auto; overflow-y: hidden;">methanol dehydrogenase protein, large subunit<br>
</div></td></tr>


<tr><th class="th11" style="border-color: rgb(0, 0, 0); border-width: 1px 0px 0px 1px; border-style: solid;" align="left" valign="top"><nobr>Orthology</nobr></th>
<td class="td11" style="border-color: rgb(0, 0, 0); border-width: 1px 1px 0px; border-style: solid;"><table border="0" cellpadding="0" cellspacing="0" width="555"><tbody><tr><td style="width: 4.5em;" align="left" valign="top"><nobr><a href="http://www.genome.jp/dbget-bin/www_bget?ko:K14028">K14028</a>&nbsp;&nbsp;</nobr></td><td align="left">methanol dehydrogenase (cytochrome c) subunit 1 [EC:<a href="http://www.genome.jp/dbget-bin/www_bget?ec:1.1.2.7">1.1.2.7</a>]</td></tr></tbody></table></td></tr>


<tr><th class="th10" style="border-color: rgb(0, 0, 0); border-width: 1px 0px 0px 1px; border-style: solid;" align="left" valign="top"><nobr>Pathway</nobr></th>
<td class="td10" style="border-color: rgb(0, 0, 0); border-width: 1px 1px 0px; border-style: solid;"><table border="0" cellpadding="0" cellspacing="0" width="555"><tbody><tr><td style="width: 5.5em;" align="left" valign="top"><nobr><a href="http://www.genome.jp/kegg-bin/show_pathway?mca00010+MCA0779">mca00010</a>&nbsp;&nbsp;</nobr></td><td align="left">Glycolysis / Gluconeogenesis</td></tr><tr><td style="width: 5.5em;" align="left" valign="top"><nobr><a href="http://www.genome.jp/kegg-bin/show_pathway?mca00625+MCA0779">mca00625</a>&nbsp;&nbsp;</nobr></td><td align="left">Chloroalkane and chloroalkene degradation</td></tr><tr><td style="width: 5.5em;" align="left" valign="top"><nobr><a href="http://www.genome.jp/kegg-bin/show_pathway?mca00680+MCA0779">mca00680</a>&nbsp;&nbsp;</nobr></td><td align="left">Methane metabolism</td></tr><tr><td style="width: 5.5em;" align="left" valign="top"><nobr><a href="http://www.genome.jp/kegg-bin/show_pathway?mca01100+MCA0779">mca01100</a>&nbsp;&nbsp;</nobr></td><td align="left">Metabolic pathways</td></tr><tr><td style="width: 5.5em;" align="left" valign="top"><nobr><a href="http://www.genome.jp/kegg-bin/show_pathway?mca01110+MCA0779">mca01110</a>&nbsp;&nbsp;</nobr></td><td align="left">Biosynthesis of secondary metabolites</td></tr><tr><td style="width: 5.5em;" align="left" valign="top"><nobr><a href="http://www.genome.jp/kegg-bin/show_pathway?mca01120+MCA0779">mca01120</a>&nbsp;&nbsp;</nobr></td><td align="left">Microbial metabolism in diverse environments</td></tr></tbody></table></td></tr>


<tr><th class="th11" style="border-color: rgb(0, 0, 0); border-width: 1px 0px 0px 1px; border-style: solid;" align="left" valign="top"><nobr>Class</nobr></th>
<td class="td11" style="border-color: rgb(0, 0, 0); border-width: 1px 1px 0px; border-style: solid;"><div style="width: 555px; overflow-x: auto; overflow-y: hidden;">Metabolism; Carbohydrate Metabolism; Glycolysis / Gluconeogenesis [PATH:<a href="http://www.genome.jp/kegg-bin/show_pathway?mca00010+MCA0779">mca00010</a>]<br>
Metabolism; Energy Metabolism; Methane metabolism [PATH:<a href="http://www.genome.jp/kegg-bin/show_pathway?mca00680+MCA0779">mca00680</a>]<br>
Metabolism; Xenobiotics Biodegradation and Metabolism; Chloroalkane and chloroalkene degradation [PATH:<a href="http://www.genome.jp/kegg-bin/show_pathway?mca00625+MCA0779">mca00625</a>]<br>
<a href="http://www.genome.jp/kegg-bin/search_brite?option=-a&amp;search_string=MCA0779&amp;prefix=mca"><img onmouseup="btn(this,'BHb')" onmouseout="btn(this,'BHb')" onmousedown="btn(this,'BHbd')" onmouseover="btn(this,'BHbh')" alt="BRITE hierarchy" name="BRH" src="mxa_F_sequence_files/button_BHb.gif" align="middle" border="0"></a></div></td></tr>


<tr><th class="th10" style="border-color: rgb(0, 0, 0); border-width: 1px 0px 0px 1px; border-style: solid;" align="left" valign="middle"><nobr>SSDB</nobr></th>
<td class="td10" style="border-color: rgb(0, 0, 0); border-width: 1px 1px 0px; border-style: solid;"><a href="http://ssdb.genome.jp/ssdb-bin/ssdb_best?org_gene=mca:MCA0779"><img onmouseup="btn(this,'Ob')" onmouseout="btn(this,'Ob')" onmousedown="btn(this,'Obd')" onmouseover="btn(this,'Obh')" alt="Ortholog" name="OC" src="mxa_F_sequence_files/button_Ob.gif" align="middle" border="0"></a><a href="http://ssdb.genome.jp/ssdb-bin/ssdb_paralog?org_gene=mca:MCA0779"><img onmouseup="btn(this,'Pb')" onmouseout="btn(this,'Pb')" onmousedown="btn(this,'Pbd')" onmouseover="btn(this,'Pbh')" alt="Paralog" name="PC" src="mxa_F_sequence_files/button_Pb.gif" align="middle" border="0"></a><a href="http://ssdb.genome.jp/ssdb-bin/ssdb_gclust?org_gene=mca:MCA0779"><img onmouseup="btn(this,'GCb')" onmouseout="btn(this,'GCb')" onmousedown="btn(this,'GCbd')" onmouseover="btn(this,'GCbh')" alt="Gene cluster" name="GC" src="mxa_F_sequence_files/button_GCb.gif" align="middle" border="0"></a><a href="http://ssdb.genome.jp/ssdb-bin/www_ssget?mca:MCA0779"><img onmouseup="btn(this,'GFITb')" onmouseout="btn(this,'GFITb')" onmousedown="btn(this,'GFITbd')" onmouseover="btn(this,'GFITbh')" alt="GFIT" name="GFIT" src="mxa_F_sequence_files/button_GFITb.gif" align="middle" border="0"></a></td></tr>


<tr><th class="th11" style="border-color: rgb(0, 0, 0); border-width: 1px 0px 0px 1px; border-style: solid;" align="left" valign="top"><nobr>Motif</nobr></th>
<td class="td11" style="border-color: rgb(0, 0, 0); border-width: 1px 1px 0px; border-style: solid;"><div style="width: 555px; overflow-x: auto; overflow-y: hidden;"><div style="float: left;">Pfam:&nbsp;</div><div style="margin-left: 3.5em;"><a href="http://www.genome.jp/dbget-bin/www_bget?pfam:PQQ">PQQ</a> <a href="http://www.genome.jp/dbget-bin/www_bget?pfam:PQQ_N">PQQ_N</a> <a href="http://www.genome.jp/dbget-bin/www_bget?pfam:PQQ_C">PQQ_C</a></div><div style="float: left;">PROSITE:&nbsp;</div><div style="margin-left: 5em;"><a href="http://www.genome.jp/dbget-bin/www_bget?prosite:BACTERIAL_PQQ_2">BACTERIAL_PQQ_2</a></div></div><a href="http://ssdb.genome.jp/ssdb-bin/ssdb_motif?kid=mca:MCA0779"><img onmouseup="btn(this,'Mb')" onmouseout="btn(this,'Mb')" onmousedown="btn(this,'Mbd')" onmouseover="btn(this,'Mbh')" alt="Motif" name="PD" src="mxa_F_sequence_files/button_Mb.gif" align="middle" border="0"></a></td></tr>


<tr><th class="th10" style="border-color: rgb(0, 0, 0); border-width: 1px 0px 0px 1px; border-style: solid;" align="left" valign="top"><nobr>Other DBs</nobr></th>
<td class="td10" style="border-color: rgb(0, 0, 0); border-width: 1px 1px 0px; border-style: solid;"><div style="width: 555px; overflow-x: auto; overflow-y: hidden;"><div style="float: left;">NCBI-GI:&nbsp;</div><div style="margin-left: 5em;"><a href="http://www.ncbi.nlm.nih.gov/protein/53804883">53804883</a></div><div style="float: left;">NCBI-GeneID:&nbsp;</div><div style="margin-left: 7em;"><a href="http://www.ncbi.nlm.nih.gov/gene/3102522">3102522</a></div><div style="float: left;">JCVI-CMR:&nbsp;</div><div style="margin-left: 5.5em;"><a href="http://cmr.jcvi.org/cgi-bin/CMR/shared/GenePage.cgi?locus=MCA_0779">MCA_0779</a></div><div style="float: left;">UniProt:&nbsp;</div><div style="margin-left: 5em;"><a href="http://www.uniprot.org/uniprot/Q60AR6">Q60AR6</a></div></div></td></tr>


<tr><th class="th11" style="border-color: rgb(0, 0, 0); border-width: 1px 0px 0px 1px; border-style: solid;" align="left" valign="top"><nobr>Position</nobr></th>
<td class="td11" style="border-color: rgb(0, 0, 0); border-width: 1px 1px 0px; border-style: solid;">823278..825083
<a href="http://www.genome.jp/kegg-bin/show_genomemap?ORG=mca&amp;ACCESSION=MCA0779"><img onmouseup="btn(this,'GMb')" onmouseout="btn(this,'GMb')" onmousedown="btn(this,'GMbd')" onmouseover="btn(this,'GMbh')" alt="Genome map" name="GM" src="mxa_F_sequence_files/button_GMb.gif" align="middle" border="0"></a></td></tr>


<tr><th class="th10" style="border-color: rgb(0, 0, 0); border-width: 1px 0px 0px 1px; border-style: solid;" align="left" valign="top"><nobr>AA seq</nobr></th>
<td class="td10" style="border-color: rgb(0, 0, 0); border-width: 1px 1px 0px; border-style: solid;">601 aa <a href="http://www.genome.jp/dbget-bin/www_bget?-f+-n+a+mca:MCA0779"><img onmouseup="btn(this,'Ab')" onmouseout="btn(this,'Ab')" onmousedown="btn(this,'Abd')" onmouseover="btn(this,'Abh')" alt="AA seq" name="XtrctA" src="mxa_F_sequence_files/button_Ab.gif" align="middle" border="0"></a><a href="http://www.genome.jp/sit-bin/search_sequence?prog=blast&amp;seqid=mca:MCA0779+aa"><img onmouseup="btn(this,'Dsb')" onmouseout="btn(this,'Dsb')" onmousedown="btn(this,'Dsbd')" onmouseover="btn(this,'Dsbh')" alt="DB search" name="blast" src="mxa_F_sequence_files/button_Dsb.gif" align="middle" border="0"></a><br>
MQICKLASGCGGSMLAMAAVLAAQSTHANSELDRLSKDDRNWVMQTKDYSATHFSRLTEI<br>
NSHNVKNLKVAWTLSTGTLHGHEGAPLVVDGIMYIHTPFPNNVYAVDLNDTRKMLWQYKP<br>
KQNPAARAVACCDVVNRGLAYVPAGEHGPAKIFLNQLDGHIVALNAKTGEEIWKMENSDI<br>
AMGSTLTGAPFVVKDKVLVGSAGAELGVRGYVTAYNIKDGKQEWRAYATGPDEDLLLDKD<br>
FNKDNPHYGQFGLGLSTWEGDAWKIGGGTNWGWYAYDPKLDMIYYGSGNPAPWNETMRPG<br>
DNKWTMTIWGRDADTGRAKFGYQKTPHDEWDYAGVNYMGLSEQEVDGKLTPLLTHPDRNG<br>
LVYTLNRETGALVNAFKIDDTVNWVKKVDLKTGLPIRDPEYSTRMDHNAKGICPSAMGYH<br>
NQGIESYDPDKKLFFMGVNHICMDWEPFMLPYRAGQFFVGATLNMYPGPKGMLGQVKAMN<br>
AVTGKMEWEVPEKFAVWGGTLATAGDLVFYGTLDGFIKARDTRTGELKWQFQLPSGVIGH<br>
PITYQHNGKQYIAIYSGVGGWPGVGLVFDLKDPTAGLGAVGAFRELAHYTQMGGSVFVFS<br>
L</td></tr>


<tr><th class="th11" style="border-color: rgb(0, 0, 0); border-width: 1px 0px 0px 1px; border-style: solid;" align="left" valign="top"><nobr>NT seq</nobr></th>
<td class="td11" style="border-color: rgb(0, 0, 0); border-width: 1px 1px 0px; border-style: solid;">1806 nt <a href="javascript:Link_XtrctSeq2(document.form1)"><img onmouseup="btn(this,'Nb')" onmouseout="btn(this,'Nb')" onmousedown="btn(this,'Nbd')" onmouseover="btn(this,'Nbh')" alt="NT seq" name="Xtrct2" src="mxa_F_sequence_files/button_Nb.gif" align="middle" border="0"></a><code>&nbsp;&nbsp;+upstream<input name="XtrctSeq_UP" value="0" size="3" type="text">nt&nbsp;&nbsp;+downstream<input name="XtrctSeq_DOWN" value="0" size="3" type="text">nt</code><br>
atgcaaatttgcaaactggcaagtggctgcggcgggtcgatgctggcgatggccgccgtg<br>
ctagccgcgcaatccacgcacgccaattcggagctggaccggctgtcgaaggacgaccgg<br>
aactgggtcatgcagaccaaggactacagcgccacccacttcagccggctgacggaaatc<br>
aatagccacaacgtcaagaacctgaaggtggcctggaccctgtccaccggcacgttgcat<br>
ggccacgaaggtgcgccgttggtggtggacggcatcatgtacatccacacgccgttcccc<br>
aacaacgtctatgcagtcgacctgaacgacacccgcaagatgctgtggcagtacaagccc<br>
aagcagaatccggcggcccgcgcggtggcttgctgcgacgtggtcaaccgcggtctggcc<br>
tacgtgccggccggcgagcacggtccggcgaagatcttcctcaaccagcttgacggccac<br>
atcgtcgcactcaacgccaagaccggcgaagagatatggaagatggaaaattccgacatc<br>
gccatgggctccaccctcaccggcgcgcctttcgtggtgaaggacaaggtactggtaggt<br>
tcggccggggccgagctgggcgtgcgtggctacgtcacggcctataacatcaaggacggc<br>
aagcaggagtggcgggcctatgccaccggtcccgacgaagacttgttgctggacaaggac<br>
ttcaacaaggacaacccgcattacggtcagttcggcctggggctctcaacctgggagggt<br>
gatgcctggaagatcggcggcggcaccaattggggctggtatgcctatgatcccaagttg<br>
gacatgatctactacggttccggcaatccggcaccctggaacgagaccatgcggcccggc<br>
gacaacaaatggaccatgaccatctggggccgcgacgccgacaccggccgcgccaagttc<br>
ggctaccagaagacgccgcacgacgagtgggattacgccggtgtcaactacatgggtctg<br>
tccgaacaggaagtggacggcaagctgacgccgctgctgacccatcccgaccgcaacggt<br>
ctggtgtatacgctgaaccgggaaaccggcgccctggtcaatgccttcaagatcgatgac<br>
accgtcaactgggtgaaaaaggtcgatctgaagaccggcctgccgatccgcgatccggag<br>
tacagcacccgcatggaccacaatgccaaaggcatctgtccctcggccatgggctatcac<br>
aaccagggcatcgagtcctacgatccggacaagaagctgttcttcatgggcgtgaaccac<br>
atctgcatggactgggagccgttcatgctgccctaccgcgccggccagttctttgtgggg<br>
gcgaccctcaacatgtatccgggacccaaggggatgctgggtcaggtcaaggcgatgaac<br>
gcggtcaccggcaagatggaatgggaagtgccggagaagtttgcggtctggggtggcacc<br>
ttggcgaccgccggcgacctcgtgttctacggtaccctcgacggcttcatcaaggcccgc<br>
gacacccgtaccggcgagctgaagtggcagttccagttgccctccggcgtgatcggccat<br>
cccatcacctatcagcacaacggcaagcaatacattgccatctactccggcgtcggcggc<br>
tggccaggagtagggctggtattcgacctgaaggacccgaccgcaggtctgggagctgtg<br>
ggtgcgttcagggaactggcgcattacacccagatgggtggatcggtgttcgtgttctcg<br>
ctttga</td></tr>

</tbody></table></td></tr></tbody></table>
<br></form></td><td valign="top"><div style="margin-top: 0px; margin-left: 1em; border: 1px solid rgb(221, 221, 221);"><div class="th10" style="font-weight: bold; line-height: 1.5em;">&nbsp;&nbsp;All links&nbsp;&nbsp;</div>
<pre style="margin-left: 1em;"><span style="color: rgb(0, 0, 102);"><a href="http://www.genome.jp/dbget-bin/get_linkdb?-t+2+mca:MCA0779">Pathway (6)</a></span>   
   <a href="http://www.genome.jp/dbget-bin/get_linkdb?-t+pathway+mca:MCA0779">KEGG PATHWAY (6)</a>   
<span style="color: rgb(0, 0, 102);"><a href="http://www.genome.jp/dbget-bin/get_linkdb?-t+6+mca:MCA0779">Chemical reaction (4)</a></span>   
   <a href="http://www.genome.jp/dbget-bin/get_linkdb?-t+enzyme+mca:MCA0779">KEGG ENZYME (1)</a>   
   <a href="http://www.genome.jp/dbget-bin/get_linkdb?-t+reaction+mca:MCA0779">KEGG REACTION (3)</a>   
<span style="color: rgb(0, 0, 102);"><a href="http://www.genome.jp/dbget-bin/get_linkdb?-t+7+mca:MCA0779">Genome (1)</a></span>   
   <a href="http://www.genome.jp/dbget-bin/get_linkdb?-t+genome+mca:MCA0779">KEGG GENOME (1)</a>   
<span style="color: rgb(0, 0, 102);"><a href="http://www.genome.jp/dbget-bin/get_linkdb?-t+8+mca:MCA0779">Gene (8)</a></span>   
   <a href="http://www.genome.jp/dbget-bin/get_linkdb?-t+orthology+mca:MCA0779">KEGG ORTHOLOGY (1)</a>   
   <a href="http://www.genome.jp/dbget-bin/get_linkdb?-t+ncbi-geneid+mca:MCA0779">NCBI-Gene (1)</a>   
   <a href="http://www.genome.jp/dbget-bin/get_linkdb?-t+ncbi-gi+mca:MCA0779">NCBI-GI (6)</a>   
<span style="color: rgb(0, 0, 102);"><a href="http://www.genome.jp/dbget-bin/get_linkdb?-t+9+mca:MCA0779">Protein sequence (2)</a></span>   
   <a href="http://www.genome.jp/dbget-bin/get_linkdb?-t+uniprot+mca:MCA0779">UniProt (1)</a>   
   <a href="http://www.genome.jp/dbget-bin/get_linkdb?-t+refpep+mca:MCA0779">RefSeq(pep) (1)</a>   
<span style="color: rgb(0, 0, 102);"><a href="http://www.genome.jp/dbget-bin/get_linkdb?-t+10+mca:MCA0779">DNA sequence (10)</a></span>   
   <a href="http://www.genome.jp/dbget-bin/get_linkdb?-t+genbank+mca:MCA0779">GenBank (5)</a>   
   <a href="http://www.genome.jp/dbget-bin/get_linkdb?-t+embl+mca:MCA0779">EMBL (5)</a>   
<span style="color: rgb(0, 0, 102);"><a href="http://www.genome.jp/dbget-bin/get_linkdb?-t+12+mca:MCA0779">Protein domain (4)</a></span>   
   <a href="http://www.genome.jp/dbget-bin/get_linkdb?-t+pfam+mca:MCA0779">Pfam (3)</a>   
   <a href="http://www.genome.jp/dbget-bin/get_linkdb?-t+prosite+mca:MCA0779">PROSITE (1)</a>   
<span style="color: rgb(0, 0, 102);"><a href="http://www.genome.jp/dbget-bin/get_linkdb?-t+18+mca:MCA0779">Others (1)</a></span>   
   <a href="http://www.genome.jp/dbget-bin/get_linkdb?-t+jcvi-cmr+mca:MCA0779">JCVI-CMR (1)</a>   
<a href="http://www.genome.jp/dbget-bin/get_linkdb?-t+alldb+mca:MCA0779">All databases (36)</a>   
</pre>
</div>
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<a href="http://www.genome.jp/dbget/">DBGET</a> integrated database retrieval system</div>

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